PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00587.1.g00070.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 413aa    MW: 44726.3 Da    PI: 4.3266
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00587.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.3e-1954103255
                           AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Zpz_sc00587.1.g00070.1.am.mk  54 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 103
                                   789******.7*********33....35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.09E-3053110No hitNo description
Gene3DG3DSA:3.30.730.102.6E-2754110IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-1954111IPR016177DNA-binding domain
PROSITE profilePS5103219.59954111IPR001471AP2/ERF domain
SMARTSM003802.3E-3554117IPR001471AP2/ERF domain
PfamPF008471.0E-1354103IPR001471AP2/ERF domain
PRINTSPR003676.1E-85566IPR001471AP2/ERF domain
PRINTSPR003676.1E-87793IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MALKRKASPG MTDGLPYEDL RSPPVAAVAS AAEPRESWAD AVGAVAAAQQ ARKRFVGVRQ  60
RPSGRWVAEI KDTIQKIRVW LGTFDTAEEA ARAYDEAACL LRGSNTRTNF WPRPAGTAAA  120
AMAARQHDSV PPTTALPSKV TNLLLLRLKK ARSGHGFGDY LDVSATTEQS LMQQQQQLRQ  180
DDGLAEDHCN FQVDDFLSYD STGDESGNVR HEDGSNCSQE ADDGGEEVVM EEEEEAPLDL  240
RFMDANPCPP AEIITPFEMV ASELGGVEAE PDADGGYGTA DAEPSTTAIH EVLKRMKYER  300
KISASLYALS GVSECLRMRL IDADDLSGDA ASRRHELAFS GLREACRKKQ HEQQQEADEE  360
GGDVGREEER ESSTSSNISS LSSSPEAASM SPEANAVDSD VLLWSSLDLP SIC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-1353110462ATERF1
3gcc_A3e-1353110462ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126201e-73CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008666751.11e-121PREDICTED: uncharacterized protein LOC103645487
TrEMBLA0A060D1N01e-121A0A060D1N0_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGGRMZM2G010100_P011e-121(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54823052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-22related to AP2 11